CDS
| Accession Number | TCMCG056C11633 |
| gbkey | CDS |
| Protein Id | XP_031388363.1 |
| Location | join(2742719..2743202,2743618..2743771,2743861..2743990,2744496..2744670,2744901..2745072,2745413..2745500,2745596..2745739,2745915..2745983,2746069..2746140,2746436..2746542,2747007..2747155,2747598..2747820,2748226..2748451,2748604..2748749,2748943..2749108,2749542..2749680,2749751..2749911,2750341..2750577) |
| Gene | LOC116201314 |
| GeneID | 116201314 |
| Organism | Punica granatum |
Protein
| Length | 1013aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA580467 |
| db_source | XM_031532503.1 |
| Definition | probable RNA-dependent RNA polymerase 5 isoform X2 [Punica granatum] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGAATGATCCCAACAACAATGGCAACGTTGGCAGTACGCAGCCTCAGCCTCAGCGAGTTCCTCTGCCTAATTCGGTGGAGGATGCTCTACGGAGAATCTGCACCGAGCAGTCCCAACCGCAGCCGGAGGCCCCAGCTCGGCGTGAGCTAGCCGACATGGGCGAGGTTGCCGCCCTGCAGGTGCTCGAGAAAATATCCGGCACGAGGATCAAGCGCTCCCTCGACGGTTTCATCGTCTATATGGGCAAACGGGCCCGCAGCACCGGCGGGTCCTCCTCCCCTTCCCCACATAAGAGCTCCTCCGAGCGGAGCGGCGGGGGTTGCCCTGCCACCAAGCAAGCTCTCCGCTTCAATGTTCAGTCCTCCCTCGACGGTTTCATCATTCGCAGCACAGGCGGACCTCCCTCCCCTTCCCCCCATAAGAGCTCCTCCGAGCGGAACTGCGGTGGTAGCCCTGCCGTCAAACAAGTTCTCAACTTCAATGATGATGCAAGTGTCAGCTCACCGATAAGAATGCACTTGGGTGAAAATTCACTCCTGGGTTCGGAAAATGGGAGTGGTGAAAGAACCAACCCTTCTGAAGCCTTGAATGAACTGGAATTTCTGAAAGCCTTTCTCCTGCTGAGCTACATCGGAGAAGCGAAGCTTGAGGAGGTCATATCAACTGATGAGATTAGGCAGCTAAAGGATCTCCAAATGGCAGATTTCGAGTCAAAAATTTGGGATAGACTTGGAAGTCGACTGGTCAAAGGAGAAGATAGATGTAAGGGGCCCTTTATAAATAAGACGAGAACACTGTTGCATAAGACACTAGGGGATGAAAATGTTCTCCTCGTGAAGTTAGAAGGTTTTTCATCAGTTGGTCACCCTGATTCCCTTGCAGTCTACAGAGAGATTGCCAAAGATGGAATTCTTGTTGGTTCCCGTAGATACCGATTCTTTGTTTTTAAAGATGGCAAAGGGGAAAGGAAGAAAGACCGAACTGCATCCTCTGTGAAGTGTTATTTTGTACATTTGGAGGGAAACCCAATTTTTGCCAACAAAAGTGTTCACGAAGCAAGATGCATGTTCATGCACGCACATACTGTGTCCAGCGTATCGAACTATATGATTAGGTTCTCACTAATCTTGTCCAAAACTGTTAGCTTGGAAGTTGATTTAGCTGGTGTAAAAGTGGAAGTCATCCCGGATGTGGAATGCAAGGACGAGAAAGGTAATACAATTTACGATAGAAAAGGAAAGCCTCTTATTCACACAGATGGGACTGGCTATGTATCTGCAGATATAGCTTCGAAGTGCCCCGGAAGTATAATCAAAGGAAAATGCATAAGTAATCAAGTGACTGAGACACTGGCTGGTTCTGGAGAGAAGACATCTGAGCAAATGCAGAGATTGGAATCACATTTTGATGAAGCGCCTTTGCTCATTCAGTGCCGTCTCTTCCATGAGGGCCGTGCAGTGAAGGGAACTCTTCTCGTTAATAATCTGCTTAATGAGAAGACAATTCAAGTTCGGGATTCTATGATCAAGGTGGAGAAAGATCCCCAACTCTCAACTAAGCAGACAGTGAATTCATTGGAAATTGTTGGAATGAGCAATAAACCAAAAGGAGCATCTCTCTCAAAGACTCTGATTGCACTTTTAAGCTATGGAGGTGTCCCCAATGATTATTTTTTGAATTTGCTGAAGAATGCTTTGGGAGATGCACGTGGTGTCTTCTCAAGCAAGCGTTCTGCGCTAAAAGTTTCCTTAAATCACTGTGAGATGGACAACTTCAATTCAGCAAGGATGATTTTGGGTGGGATTCCTCTGGAAGAGCCGTATCTTCATTTCCATCTGTCAATACTGATGAAGTTGGAGAAGAAGAGCTTACGGTCAGGAAGAATTCCCATTCCTGATTCGTACTACTTAATGGGGACAGCTGACCCTACCGGAAGCCTCAAACCCGATGAAGTTTGCATCATTCTAGACTCTGGACAAATATCGGGAGAAGTATTGGTGTACCGAAATCCTGGGCTGCACTTTGGAGATATCCATGTTTTGAAAGCCACATACCGGGAGGAGCTGGAGGCCTATGTTGGAAATTCCAAGTATGGTATCCTTTTCCCAAGTGTTGGTCCCCGCTCTTTGGCTGATGAAATTGCTGGCGGTGACTTTGATGGAGACATGTATTGGGTCTCGAGGAACCCTCAGCTTCTGAAATATTATAAGCTGAGCAAGCCGTGGACATCTGCCTCTATTCAACAAGTTGTGAATTCCACGAAGCCCAGTGACTTGACTGCTGATCAACTGGAGGAGGAGTTAATCAACCTTTGGTTAACTGCGAGGTTCCGGCCAAGTTATGCAATCAGTGAGGCAGCTGACAGTTGGCAGGCGTTGATGGATCGGTTCCTCACGATCAGTGCTGATCAGCCCCAAGAGAGAGATCTAATGGAACGAAATATGCTGCAATTGATCGATTTATATTATGATGCTCTCGATCAACCCAAGAAAGGAGGGAAAAAGGTCGAGGTCCCACCGGAGCTGAAGGCAGATGTGTTTCCCCATTACATGGGGAAGAATGACTCCTATACTTCGTCTTCGATCCTGGGAATTATATACGATACTGTCAATTCATTTCTAGAAGAAGACCATACTGTGCGAGAAGTGTGGAAGCTCCCCATTTTTGATGTTGGAGTTTCTGAGGCCTGCCTTAAGAAGTGGACTGATCTATACGATAATTACCGGAAAGACATGGCAGCAGCCTTGAACCGTGATGAGGGCGAGGACGAGTCCGCAGATGAAGTCATACAAAAGTACAAGCAGATCTTTTTAGAGGCTGCGGAATTCGAGGAGAGCTCGAGGAGGGAGGAGGATATATTTGAGGAGGCGCTTGCGATTTACAACATCACTTATGACTATGCGAAGAATGTGGGATCGGTAGGCCTATGCGCTTTTGCATGGAGGGTCGCTGGTTCTGCTCTCTGCAAGTTCCATGCGATGAAGCAAGGCGAGAAGTCCATCACCTGTCTGCCCTCCATTCTCAAGGAGATCTTGTCTTAG |
| Protein: MNDPNNNGNVGSTQPQPQRVPLPNSVEDALRRICTEQSQPQPEAPARRELADMGEVAALQVLEKISGTRIKRSLDGFIVYMGKRARSTGGSSSPSPHKSSSERSGGGCPATKQALRFNVQSSLDGFIIRSTGGPPSPSPHKSSSERNCGGSPAVKQVLNFNDDASVSSPIRMHLGENSLLGSENGSGERTNPSEALNELEFLKAFLLLSYIGEAKLEEVISTDEIRQLKDLQMADFESKIWDRLGSRLVKGEDRCKGPFINKTRTLLHKTLGDENVLLVKLEGFSSVGHPDSLAVYREIAKDGILVGSRRYRFFVFKDGKGERKKDRTASSVKCYFVHLEGNPIFANKSVHEARCMFMHAHTVSSVSNYMIRFSLILSKTVSLEVDLAGVKVEVIPDVECKDEKGNTIYDRKGKPLIHTDGTGYVSADIASKCPGSIIKGKCISNQVTETLAGSGEKTSEQMQRLESHFDEAPLLIQCRLFHEGRAVKGTLLVNNLLNEKTIQVRDSMIKVEKDPQLSTKQTVNSLEIVGMSNKPKGASLSKTLIALLSYGGVPNDYFLNLLKNALGDARGVFSSKRSALKVSLNHCEMDNFNSARMILGGIPLEEPYLHFHLSILMKLEKKSLRSGRIPIPDSYYLMGTADPTGSLKPDEVCIILDSGQISGEVLVYRNPGLHFGDIHVLKATYREELEAYVGNSKYGILFPSVGPRSLADEIAGGDFDGDMYWVSRNPQLLKYYKLSKPWTSASIQQVVNSTKPSDLTADQLEEELINLWLTARFRPSYAISEAADSWQALMDRFLTISADQPQERDLMERNMLQLIDLYYDALDQPKKGGKKVEVPPELKADVFPHYMGKNDSYTSSSILGIIYDTVNSFLEEDHTVREVWKLPIFDVGVSEACLKKWTDLYDNYRKDMAAALNRDEGEDESADEVIQKYKQIFLEAAEFEESSRREEDIFEEALAIYNITYDYAKNVGSVGLCAFAWRVAGSALCKFHAMKQGEKSITCLPSILKEILS |